Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936950.1_cds_XP_016482345.1_73583
CDS Infomation

[gene=LOC107803222] [db_xref=GeneID:107803222] [protein=pectinesterase-like] [protein_id=XP_016482345.1] [location=join(79572..79653,82028..82337,82586..83124,84690..85369)] [gbkey=CDS]
Sequence

ATGTATTCGACTGTATTCGCAAGCTGTATTCGTGATACAATAACGAAATTTGCGAAAAAA
GGTCTTCAGCTGTTTAAAAACGCAAATGCAATTTCCCCTTTTTCTTCAGAATCCTTTTGC
AGCTATACACCATTCCCCGAATTTTGCAAATACATGTTACCGATCAACAAGTCTGCTACT
ATTCAAGACTATGGCCGTCTCTCTCTTCACCATTCCTTATCAATGAATGATCATCTCCTT
TCTTTGGTCAATGACGATCTCTTTAATCTTCGATATGCATTGCCTGAAACCACCATTCGT
GCCCTTGAAGATTGCCAACTTCTCTGTAGCTTGAACCATGACTTTATTTTAAGCGCCATT
CAGTCCATCCATTCTACAAACATGCTTGAAAGGTTACAAGCTAAAGATATTCAAACGGTG
CTAAGTGCCATATTAACAAACCAAGAAACTTGTTCCGACGGTCTCAAAGATGTAGCTGTT
GGTACAATCGTGACAAATATGCTTCTATCTCCATTATCGGATGGGGCCAAATCTTTTAGC
GTTTCATTAGCACTTTTCATGCATGGATGGGGTTATTCCGCTATCAAATCCCGATCACTA
TCAGAGAAGAAATTTCCATTTTCTGGTGGAAGGAAACTGCTTCAGTCAAATGAATATGGT
GTGACTGTGAATCAAAGCGTGGTTGTGAATCCTGATGGAAGTGGTAACTTCATAACTATT
AATGAAGCTGTGGCTGCAGCTCCCAACAATACTGCTGCAGGCAGTGGTTATTTCTTGATT
CATGTGGTGGCTGGTGTTTACGAAGAATATGTTTCCATTCCCAGTAACAAACGGTATATT
ATGATGACGGGTGATGGGATCAACAAGACTATTATTACTGGAAACAGGAGTGTGGCTGAT
GGTTGGACTACATTTAGTTCTGCAACATTTGCTGTAACCGGGAAAGGATTCGTTGCTATG
AACATAACCTTTAGAAACACGGCAGGATCAATCAAGCACCAAGCGGTAGCTATAAGAAAT
GGTGCAGACATGTCCACATTTTATGGCTGTAGCTTTGAAGGGTACCAAGACACCATGTAT
ACTCACTCCCTAAGGCAATTTTATAGAGAATGCGATATTTATGGGACAGTGGATTTCATA
TTCGGGAATGCTGCTGTAGTGTTCCAAAATTGCAACATTTATCCGCGTCTCCCAATGCCT
AATCAATTCAATGCCATTACGGCACAGGGCAGAATGGATATCAATCAAAACACTGGAATT
TCAGTCCAAAATTGCAGCATCAAAGCTGCCCAAGACTTGGCTTCTACTCAAACTTTTCTA
GGGAGGCCATGGAAAGAGTACTCGAGAACGGTGTATATACAATCATTTATGGACAGTTTG
ATTGATCTTGCTGGTTGGTCTCCATGGTCGGGAGATTTTGCTCTCAATACATTGTATTAT
GCTGAATACGCCAACACAGGGCCAGGGTCTGTGACCACTAATAGAGTCACTTGGCAAGGC
TACCATGTGATAAATGAGACGGATGCTGTCAACTTCACTGTTTCAAGTTTAATTCAAGGA
GATGTTTGGTTGCCTGCAACTGGAGTTCCTTTTACTAGTGGCTTACTTTGA

Peptide Sequence

PEP ID

XP_016482345.1
PEP Infomation

PREDICTED: pectinesterase-like [Nicotiana tabacum]
Sequence

MYSTVFASCIRDTITKFAKKGLQLFKNANAISPFSSESFCSYTPFPEFCKYMLPINKSAT
IQDYGRLSLHHSLSMNDHLLSLVNDDLFNLRYALPETTIRALEDCQLLCSLNHDFILSAI
QSIHSTNMLERLQAKDIQTVLSAILTNQETCSDGLKDVAVGTIVTNMLLSPLSDGAKSFS
VSLALFMHGWGYSAIKSRSLSEKKFPFSGGRKLLQSNEYGVTVNQSVVVNPDGSGNFITI
NEAVAAAPNNTAAGSGYFLIHVVAGVYEEYVSIPSNKRYIMMTGDGINKTIITGNRSVAD
GWTTFSSATFAVTGKGFVAMNITFRNTAGSIKHQAVAIRNGADMSTFYGCSFEGYQDTMY
THSLRQFYRECDIYGTVDFIFGNAAVVFQNCNIYPRLPMPNQFNAITAQGRMDINQNTGI
SVQNCSIKAAQDLASTQTFLGRPWKEYSRTVYIQSFMDSLIDLAGWSPWSGDFALNTLYY
AEYANTGPGSVTTNRVTWQGYHVINETDAVNFTVSSLIQGDVWLPATGVPFTSGLL

Transcript Sequence

Gene sequence data has not been registered.